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Databases

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HERE one can find the list of all the databases, that can be used in the data retrieval, efforts are made to keep the information updated to the latest, but still, if in case because of any reason, you are not able to find the link that you expected, please to intimate me, just drop an e-mail to me, and I will take care of the rest.


Major Sequence Repositories:


DDBJ:
DNA databank of Japan
EMBL: Maintained by EMBL
GenBank: Maintained by NCBI

Human Chromosome Information:
1 2 3 4
5 6 7 8
9 10 11 12
13 14 15 16
17 18 19 20
21 22 X Y

RNA Databases:
Rfam: RNA familiy database
RNA base:  Database of RNA structures

tRNA database:  Database of  tRNAs
tRNA:  tRNA sequences and genes
sRNA:  Small RNA database

Protein Structure Databases:
Cath:  Protein structure classification
HIV Protease:  HIV protease database 3D structure
PDB:  3-D macromolecular structure data
PSI: Protein structure initiative
S2F: Structure to function project
Scop:  Structural Classification of Proteins

Protein Sequence Databases:

BRENDA: Enzyme database
Histons:  Histone sequence database
HPRD:  Human protein reference database
IInterPro: Intergrated documentation 5resources for protein families
KIND:  A non-redundant protein sequence database
MIPS:  Munich information centre for protein sequences
PIR:  Annotated, and non-redundant protein sequence database
PIR-NREF: PIR nonredundent reference protein database
PRF: Protein research foundation, Japan
ProtoMap:  Hierarchical classification of swissprot proteins
REBASE:  Restriction enzyme database
RefSeq:   Reference sequence database at NCBI
SwissProt:  Curated protein sequence database
TrEMBL:  Annotated translations of EMBL nucleotide sequences

WD repeats:  WD-repeat family of proteins

Diseases and Disorders:
Adam Medical Encyclopedia: Alphabetical listing of disease information
Allergy Newswire: Allergy health news lette
Asthma: Asthma gene database
CancerPage: Cancer specific information
CancerOptions.com: Cancer specific health care portal
Cancer Track: Tracking cancer online
Diabetes Monitor: Monitoring diabetes happenings everywhere in cyberspace
Diseases: Alphabetical list of disease at Karolinska Institute
ImmuneDisease.com: Immunology and immuno deficiency related information
Inflammation: A good inflammation resource
Ion Channel Diseases: Ion channels,transmitters, receptors and diseases
Kidney: The kidney development database
Malaria: An information resource on malaria research
MedicineNet: Medical dictionary
Merck Index: Merck manual of diagnosis and therapy
Museum of Human Diseae: An image database of diseases
Nervous System Diseases: Nervous System Diseases at Karolinska Institute
Pathology Informatics: Query over 100,000 disease-related information packets
Prion: Prion diseases
Rheumatoid Arthritis: European consortium on rheumatoid arthritis families
SARS Reference: SARS reference
SEER (NCI): Surveillance & Epidemiology information from NCI
Virology Info: Excellent site for virology information at Tulane University

Biochemical pathways
BRITE: Biomolecular Relations in Information Transmission and Expression
EcoCyc/MetaCyc: Encyclopedia of E. coli genes and metabolism; Metabolic encyclopedia
EMP: Metabolic pathways
KEGG: Kyoto encyclopedia of genes and genomes
Biochemical Pathways: Enzyme database and link to biochemical pathway map
Interactive Fly: Biochemical pathways in Drosophila
Metabolic Pathway: Metabolic pathways of biochemistry
Molecular interaction: Kohn molecular interaction maps
Malaria parasite: Malaria Parasite metabolic pathways
aMAZE: Protein function and biochemical pathways project at EBI
PathDB: Metabolic pathway information
UM-BBD: Microbial biocatalytic reactions and biodegradation pathways primarily for xenobiotic, chemical compounds
WIT: Function assignments to genes and the development of metabolic models
THCME Medical Biochemistry: Descrition of several metabolic and biochemical pathways

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